Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MS53_0073Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0658;TC:3.A.11.1.1. (373 aa)    
Predicted Functional Partners:
MS53_0074
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1466.
     
 0.881
MS53_0072
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1555.
  
  
 0.844
MS53_0075
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
       0.752
smf
Putative DNA processing protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0758.
  
  
 0.747
comEB
Deoxycytidylate deaminase fusion protein; Identified by sequence similarity; putative; ORF located using Blastx;COG2131.
  
  
 0.713
recA
Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.693
pheT
Putative phenylalanyl-tRNA synthetase beta chain; Identified by sequence similarity; putative; ORF located using Blastx;COG0072; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
   
 0.644
cls
Cardiolipin synthetase; Identified by sequence similarity; putative; ORF located using Blastx;COG1502.
   
 
 0.633
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
     
 0.621
MS53_0069
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
  
 0.549
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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