STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0086Putative ABC transporter atp-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG3638. (256 aa)    
Predicted Functional Partners:
MS53_0085
Putative transport system permease protein p69; Identified by sequence similarity; putative; ORF located using Blastx;COG3639;TC:3.A.1.9.1.
 
 
 0.992
MS53_0087
Putative P37-like ABC transporter substrate-binding lipoprotein; Part of a high-affinity transport system.
 
  
  0.988
oppD
Oligopeptide ABC transporter ATP-binding protein OppD; Identified by sequence similarity; putative; ORF located using Blastx;COG0444;TC:3.A.1.5.2; Belongs to the ABC transporter superfamily.
 
    
0.906
oppD-1
Oligopeptide ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0444;TC:3.A.1.5.2; Belongs to the ABC transporter superfamily.
 
    
0.905
ecfA2
Putative ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.816
MS53_0472
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx.
  
     0.524
MS53_0517
Putative lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx.
  
     0.512
acpD
Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
       0.495
MS53_0507
Putative ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1132;TC:3.A.1.123.1.
 
     
0.448
MS53_0109
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
  
 0.446
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.