Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
bcrAABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1131. (233 aa)    
Predicted Functional Partners:
MS53_0129
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
 
  
 0.963
ecfA1
Putative ABC transporter atp-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.910
ecfA2
Putative ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.889
MS53_0131
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
       0.818
MS53_0132
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
       0.818
MS53_0133
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
       0.818
MS53_0134
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
       0.773
atpC
Putative ATP synthase epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.733
oppD-1
Oligopeptide ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0444;TC:3.A.1.5.2; Belongs to the ABC transporter superfamily.
    
0.711
secA
Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.637
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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