Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mglASugar ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG3845;TC:3.A.1.2.6. (603 aa)    
Predicted Functional Partners:
MS53_0138
Putative sugar ABC transporter permease protein; Identified by sequence similarity; putative; ORF located using Blastx;COG4603;TC:3.A.1.2.7; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
MS53_0139
Putative sugar ABC transporter permease protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1079;TC:3.A.1.2.2; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
xylF
ABC transporter xylose-binding lipoprotein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1744.
 
 
 0.988
dgk
Deoxyguanosine kinase; Identified by sequence similarity; putative; ORF located using Blastx;COG1428.
       0.773
MS53_0141
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1428.
       0.773
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
      0.432
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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