STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0179Putative chromate transport protein; Identified by sequence similarity; putative; ORF located using Blastx;COG2059. (210 aa)    
Predicted Functional Partners:
MS53_0180
Putative chromate transport protein; Identified by sequence similarity; putative; ORF located using Blastx;COG2059;TC:2.A.51.1.3.
 
     0.889
MS53_0481
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0477.
 
     0.722
MS53_0339
Putative PTS system, lichenan-specific IIA component; Identified by sequence similarity; putative; ORF located using Blastx;COG0510.
  
     0.709
MS53_0087
Putative P37-like ABC transporter substrate-binding lipoprotein; Part of a high-affinity transport system.
  
     0.701
licA
PTS system, lichenan-specific IIA component; Identified by sequence similarity; putative; ORF located using Blastx;COG0510.
  
     0.693
MS53_0014
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1214.
  
     0.657
hemK
Protoporphirogen oxidase HemK; Identified by sequence similarity; putative; ORF located using Blastx;COG2890.
       0.609
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.605
tktA
Transketolase; Identified by sequence similarity; putative; ORF located using Blastx;COG0021; Belongs to the transketolase family.
       0.577
MS53_0328
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.537
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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