STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0221Putative phase-variable hemagglutinin; ORF46;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx. (333 aa)    
Predicted Functional Partners:
MS53_0222
Putative phase-variable hemagglutinin; ORF45;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.693
MS53_0223
Putative phase-variable hemagglutinin; ORF44;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.569
MS53_0220
Putative phase-variable hemagglutinin; ORF47;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.440
MS53_0224
Putative phase-variable hemagglutinin; ORF43;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.433
MS53_0219
Putative phase-variable hemagglutinin; ORF48;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.402
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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