STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0228Putative phase-variable hemagglutinin; ORF39;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx. (72 aa)    
Predicted Functional Partners:
MS53_0227
Putative phase-variable hemagglutinin; ORF40;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
       0.773
MS53_0226
Putative phase-variable hemagglutinin; ORF41;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.714
MS53_0229
Putative phase-variable hemagglutinin; ORF38;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.610
MS53_0225
Putative phase-variable hemagglutinin; ORF42;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.573
MS53_0230
Putative phase-variable hemagglutinin; ORF37;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.502
MS53_0224
Putative phase-variable hemagglutinin; ORF43;Could be the product of a pseudogene. N-terminal region is truncated;identified by sequence similarity; putative; ORF located using Blastx.
      
0.493
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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