STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0294Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0477. (643 aa)    
Predicted Functional Partners:
MS53_0041
Putative ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1136;TC:3.A.1.125.1.
 
     0.789
MS53_0293
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
       0.779
MS53_0435
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1970.
 
   
 0.585
MS53_0700
Hypothetical protein.
       0.540
MS53_0044
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0561.
  
     0.525
MS53_0462
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
    0.521
MS53_0471
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0810.
 
     0.437
MS53_0463
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;GeneMark;Blastx.
  
     0.433
cas9
Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. [...]
  
     0.410
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.