Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cysScysteinyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Blastx;COG0215. (406 aa)    
Predicted Functional Partners:
MS53_0067
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG3557.
 
      0.859
MS53_0358
Putative tRNA/rRNA methyltransferase; Identified by sequence similarity; putative; ORF located using Blastx;COG0566; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
 
 0.852
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
 
  
 0.792
argS
arginyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0018; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.791
metG
methionyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Blastx;COG0143; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.720
MS53_0359
Hypothetical protein.
       0.709
nusG
Transcription antitermination protein; Participates in transcription elongation, termination and antitermination.
 
   
 0.706
leuS
leucyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Blastx;COG0495; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.673
MS53_0528
Identified by sequence similarity; putative; ORF located using Blastx;COG0258.
     
 0.655
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
 
 0.649
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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