STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0359Hypothetical protein. (195 aa)    
Predicted Functional Partners:
MS53_0358
Putative tRNA/rRNA methyltransferase; Identified by sequence similarity; putative; ORF located using Blastx;COG0566; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.773
cysS
cysteinyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Blastx;COG0215.
       0.709
argS
arginyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0018; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.505
MS53_0360
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0690; Belongs to the SecE/SEC61-gamma family.
       0.450
nusG
Transcription antitermination protein; Participates in transcription elongation, termination and antitermination.
       0.450
fba
Fructose-bisphosphate aldolase; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx;COG0191.
       0.439
MS53_0355
Hypothetical protein.
       0.439
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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