STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lip3Triacylglycerol lipase; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0596. (262 aa)    
Predicted Functional Partners:
MS53_0062
Putative acyl carrier protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0236.
  
 
 0.941
MS53_0385
Putative glycerol transporter subunit C; Identified by sequence similarity; putative; ORF located using Blastx;COG0395;TC:3.A.1.1.4.
 
    0.903
MS53_0384
Putative glycerol transporter subunit B; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1175;TC:3.A.1.1.16.
 
     0.817
MS53_0383
Putative glycerol transporter subunit A; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG3839.
 
     0.810
MS53_0386
Putative lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx.
       0.757
MS53_0481
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0477.
 
   
 0.715
nox
NADH oxidase; Identified by sequence similarity; putative; ORF located using Blastx;COG0446.
  
 
 0.680
atpH
ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.
    
   0.664
atpD-2
ATP synthase beta chain; Identified by sequence similarity; putative; ORF located using Blastx;COG0055.
  
   0.532
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
   0.532
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.