Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rsuA16S rRNA uridine-516 pseudouridylate synthase and related Pseudouridylate synthase; Identified by sequence similarity; putative; ORF located using Blastx;COG1187; Belongs to the pseudouridine synthase RsuA family. (234 aa)    
Predicted Functional Partners:
MS53_0416
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
       0.773
cmk
Cytidylate kinase; Identified by sequence similarity; putative; ORF located using Blastx;COG0283.
  
  
 0.568
MS53_0415
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
       0.558
pheT
Putative phenylalanyl-tRNA synthetase beta chain; Identified by sequence similarity; putative; ORF located using Blastx;COG0072; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.472
engA
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.421
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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