STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0423Putative amino acid permease; Identified by sequence similarity; putative; ORF located using Blastx;COG0531;TC:2.A.3.6.1. (572 aa)    
Predicted Functional Partners:
MS53_0108
Identified by sequence similarity; putative; ORF located using Blastx;COG0366.
   
 0.991
MS53_0539
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1881.
  
     0.673
MS53_0482
Putative amino acid permease; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0531;TC:2.A.3.2.3.
  
     0.670
MS53_0538
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1881.
  
     0.663
asnS
asparaginyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0017.
  
    0.531
pdhD
Dihydrolipoamide dehydrogenase; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx;COG1249.
   
 
 0.510
ptsG
PTS system, glucose-specific IIABC component; Identified by sequence similarity; putative; ORF located using Blastx;COG1263;TC:4.A.1.1.2.
  
   
 0.477
MS53_0491
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG4487.
  
     0.477
truB
tRNA pseudouridine synthase B; Identified by sequence similarity; putative; ORF located using Blastx;COG0130; Belongs to the pseudouridine synthase TruB family.
   
   0.435
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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