Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MS53_0433Putative ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1112. (1060 aa)    
Predicted Functional Partners:
MS53_0434
Putative PTS system glucose-specific enzyme IIB component; Identified by sequence similarity; putative; ORF located using Blastx;COG1264.
  
    0.822
MS53_0706
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0640.
       0.799
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
     0.758
MS53_0325
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.750
lspA
Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
     0.719
MS53_0395
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
     0.694
MS53_0349
Putative lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx.
 
    0.633
MS53_0435
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1970.
 
     0.589
MS53_0511
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0687.
  
    0.529
atpB
ATP synthase A chain; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0356;TC:3.A.2.1.2.
  
     0.510
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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