STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0434Putative PTS system glucose-specific enzyme IIB component; Identified by sequence similarity; putative; ORF located using Blastx;COG1264. (121 aa)    
Predicted Functional Partners:
nagC
N-acetylmannosamine kinase; Identified by sequence similarity; putative; ORF located using Blastx;COG1940.
  
 
 0.899
ptsG
PTS system, glucose-specific IIABC component; Identified by sequence similarity; putative; ORF located using Blastx;COG1263;TC:4.A.1.1.2.
  
 
 0.894
MS53_0433
Putative ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1112.
  
    0.821
MS53_0706
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0640.
  
    0.811
MS53_0435
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1970.
       0.483
aspS
aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.483
hisS
histidyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Blastx;COG0124.
       0.463
MS53_0438
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
       0.463
pknB
Serine/threonine-protein kinase; Identified by sequence similarity; putative; ORF located using Blastx;COG0515.
    
 
 0.441
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.