Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MS53_0463Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;GeneMark;Blastx. (774 aa)    
Predicted Functional Partners:
MS53_0462
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.928
MS53_0466
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.866
MS53_0468
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.864
MS53_0471
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0810.
 
     0.829
MS53_0070
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.773
MS53_0069
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.769
MS53_0590
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;TC:9.B.4.4.1.
  
     0.753
MS53_0157
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
 
     0.743
MS53_0041
Putative ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1136;TC:3.A.1.125.1.
  
     0.706
MS53_0044
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0561.
  
     0.618
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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