Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MS53_0481Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0477. (492 aa)    
Predicted Functional Partners:
MS53_0385
Putative glycerol transporter subunit C; Identified by sequence similarity; putative; ORF located using Blastx;COG0395;TC:3.A.1.1.4.
  
    0.774
MS53_0179
Putative chromate transport protein; Identified by sequence similarity; putative; ORF located using Blastx;COG2059.
 
     0.721
lip3
Triacylglycerol lipase; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0596.
 
 
 
 0.709
licA
PTS system, lichenan-specific IIA component; Identified by sequence similarity; putative; ORF located using Blastx;COG0510.
  
     0.691
MS53_0339
Putative PTS system, lichenan-specific IIA component; Identified by sequence similarity; putative; ORF located using Blastx;COG0510.
  
     0.681
MS53_0482
Putative amino acid permease; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0531;TC:2.A.3.2.3.
  
 
 0.669
MS53_0383
Putative glycerol transporter subunit A; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG3839.
  
     0.627
pgiB
Glucose-6-phosphate isomerase; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx;COG0166.
  
    0.606
MS53_0087
Putative P37-like ABC transporter substrate-binding lipoprotein; Part of a high-affinity transport system.
  
     0.476
MS53_0129
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.452
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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