Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MS53_0511Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0687. (651 aa)    
Predicted Functional Partners:
potC
Spermidine/putrescine transport system permease PotC; Identified by sequence similarity; putative; ORF located using Blastx;COG1177;TC:3.A.1.11.1.
  
 0.998
potB
Spermidine/putrescine ABC transporter permease protein PotB; Identified by sequence similarity; putative; ORF located using Blastx;COG1176;TC:3.A.1.11.1.
  
 
 0.991
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
  0.958
MS53_0458
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.774
MS53_0328
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.772
MS53_0371
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;TC:1.C.57.1.1.
  
     0.772
MS53_0349
Putative lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx.
  
    0.770
MS53_0415
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
     0.769
lspA
Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
     0.766
MS53_0175
Putative membrane protein P80; Identified by sequence similarity; putative; ORF located using Blastx.
  
     0.765
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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