STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ktrBPutative potassium uptake protein KtrB; Identified by sequence similarity; putative; ORF located using Blastx;COG0168;TC:2.A.38.4.2. (547 aa)    
Predicted Functional Partners:
ktrA
Putative potassium uptake protein KtrA; Identified by sequence similarity; putative; ORF located using Blastx;COG0569;TC:2.A.38.4.3.
 
 
 0.999
MS53_0126
Putative potassium channel protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1226;TC:1.A.1.6.1.
  
 
 0.958
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
       0.646
MS53_0435
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1970.
     
 0.636
tdk
Thymidine kinase; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1435.
       0.521
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.