STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0553Putative ABC transporter permease protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1284. (405 aa)    
Predicted Functional Partners:
lspA
Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
     0.722
MS53_0325
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.690
MS53_0328
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.552
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
     0.541
MS53_0371
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;TC:1.C.57.1.1.
  
     0.514
MS53_0511
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0687.
 
    0.441
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.