Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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MS53_0568Putative tRNA/rRNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. (178 aa)    
Predicted Functional Partners:
MS53_0569
Putative tRNA/rRNA methyltransferase; Identified by sequence similarity; putative; ORF located using Blastx;COG0566.
     
 0.832
lig
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.773
MS53_0570
Hypothetical protein.
       0.773
truB
tRNA pseudouridine synthase B; Identified by sequence similarity; putative; ORF located using Blastx;COG0130; Belongs to the pseudouridine synthase TruB family.
     
 0.653
ribF
Riboflavin kinase / FMN adenylyltransferase; Identified by sequence similarity; putative; ORF located using Blastx;COG0196.
     
 0.645
MS53_0564
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0561.
       0.571
MS53_0566
Hypothetical protein.
       0.561
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
  
    0.508
trmB
Putative methlytransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.414
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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