| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaN | pcrA | MS53_0002 | MS53_0544 | DNA polymerase III beta subunit; Identified by sequence similarity; putative; ORF located using Blastx;COG0592. | Atp-dependent helicase; Identified by sequence similarity; putative; ORF located using Blastx;COG0210. | 0.963 |
| dnaN | recA | MS53_0002 | MS53_0561 | DNA polymerase III beta subunit; Identified by sequence similarity; putative; ORF located using Blastx;COG0592. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.944 |
| dnaN | recD | MS53_0002 | MS53_0617 | DNA polymerase III beta subunit; Identified by sequence similarity; putative; ORF located using Blastx;COG0592. | Exodeoxyribonuclease V, alpha subunit; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0507. | 0.954 |
| dnaN | topA | MS53_0002 | MS53_0531 | DNA polymerase III beta subunit; Identified by sequence similarity; putative; ORF located using Blastx;COG0592. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.909 |
| pcrA | dnaN | MS53_0544 | MS53_0002 | Atp-dependent helicase; Identified by sequence similarity; putative; ORF located using Blastx;COG0210. | DNA polymerase III beta subunit; Identified by sequence similarity; putative; ORF located using Blastx;COG0592. | 0.963 |
| pcrA | recA | MS53_0544 | MS53_0561 | Atp-dependent helicase; Identified by sequence similarity; putative; ORF located using Blastx;COG0210. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.978 |
| pcrA | recD | MS53_0544 | MS53_0617 | Atp-dependent helicase; Identified by sequence similarity; putative; ORF located using Blastx;COG0210. | Exodeoxyribonuclease V, alpha subunit; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0507. | 0.834 |
| pcrA | ruvB | MS53_0544 | MS53_0165 | Atp-dependent helicase; Identified by sequence similarity; putative; ORF located using Blastx;COG0210. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.474 |
| pcrA | topA | MS53_0544 | MS53_0531 | Atp-dependent helicase; Identified by sequence similarity; putative; ORF located using Blastx;COG0210. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.903 |
| pth | recD | MS53_0616 | MS53_0617 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Exodeoxyribonuclease V, alpha subunit; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0507. | 0.825 |
| pth | tilS | MS53_0616 | MS53_0615 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Conserved hypothetical protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.876 |
| recA | dnaN | MS53_0561 | MS53_0002 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA polymerase III beta subunit; Identified by sequence similarity; putative; ORF located using Blastx;COG0592. | 0.944 |
| recA | pcrA | MS53_0561 | MS53_0544 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Atp-dependent helicase; Identified by sequence similarity; putative; ORF located using Blastx;COG0210. | 0.978 |
| recA | recD | MS53_0561 | MS53_0617 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Exodeoxyribonuclease V, alpha subunit; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0507. | 0.889 |
| recA | recR | MS53_0561 | MS53_0053 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Putative recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.834 |
| recA | ruvA | MS53_0561 | MS53_0164 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.862 |
| recA | ruvB | MS53_0561 | MS53_0165 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.837 |
| recA | topA | MS53_0561 | MS53_0531 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.973 |
| recA | truB | MS53_0561 | MS53_0565 | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | tRNA pseudouridine synthase B; Identified by sequence similarity; putative; ORF located using Blastx;COG0130; Belongs to the pseudouridine synthase TruB family. | 0.469 |
| recD | dnaN | MS53_0617 | MS53_0002 | Exodeoxyribonuclease V, alpha subunit; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0507. | DNA polymerase III beta subunit; Identified by sequence similarity; putative; ORF located using Blastx;COG0592. | 0.954 |