Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
MS53_0657Putative ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1131. (312 aa)    
Predicted Functional Partners:
MS53_0658
Putative ABC transporter; Identified by sequence similarity; putative; ORF located using Blastx;COG0842.
 
  
 0.969
oppD-1
Oligopeptide ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0444;TC:3.A.1.5.2; Belongs to the ABC transporter superfamily.
     
0.902
pgm
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
   0.827
atpC
Putative ATP synthase epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
   0.768
MS53_0186
Putative oligopeptide ABC transporter ATP-binding protein OppF; Identified by sequence similarity; putative; ORF located using Blastx;COG1124; Belongs to the ABC transporter superfamily.
     
0.662
MS53_0661
Putative ABC transporter permease protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0619.
     
 0.544
MS53_0507
Putative ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1132;TC:3.A.1.123.1.
 
 
0.539
ecfA1
Putative ABC transporter atp-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.521
trxM
Thioredoxin; Identified by sequence similarity; putative; ORF located using Blastx;COG0526; Belongs to the thioredoxin family.
       0.510
ecfA2
Putative ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
   
0.502
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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