STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0657Putative ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1131. (312 aa)    
Predicted Functional Partners:
MS53_0658
Putative ABC transporter; Identified by sequence similarity; putative; ORF located using Blastx;COG0842.
 
  
 0.967
oppD-1
Oligopeptide ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0444;TC:3.A.1.5.2; Belongs to the ABC transporter superfamily.
     
0.902
atpC
Putative ATP synthase epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
   0.876
pgm
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
   0.807
MS53_0507
Putative ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1132;TC:3.A.1.123.1.
 
0.734
MS53_0506
Putative ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1132;TC:3.A.1.106.1.
 
0.717
atpD-2
ATP synthase beta chain; Identified by sequence similarity; putative; ORF located using Blastx;COG0055.
    
   0.716
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
   0.716
atpD-3
ATP synthase beta chain; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx;COG0055.
    
   0.716
atpA-2
ATP synthase alpha chain; Identified by sequence similarity; putative; ORF located using Blastx;COG0056.
    
   0.712
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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