Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MS53_0661Putative ABC transporter permease protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0619. (293 aa)    
Predicted Functional Partners:
ecfA1
Putative ABC transporter atp-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
ecfA2
Putative ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
MS53_0008
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
   
 
 0.875
MS53_0186
Putative oligopeptide ABC transporter ATP-binding protein OppF; Identified by sequence similarity; putative; ORF located using Blastx;COG1124; Belongs to the ABC transporter superfamily.
  
 
 0.832
oppF-1
Oligopeptide ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;TC:3.A.1.5.1; Belongs to the ABC transporter superfamily.
  
 
 0.832
MS53_0501
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
 
 0.807
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
 
     0.554
MS53_0657
Putative ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1131.
     
 0.544
pgm
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.510
MS53_0658
Putative ABC transporter; Identified by sequence similarity; putative; ORF located using Blastx;COG0842.
       0.497
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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