STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS53_0673Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG1461. (550 aa)    
Predicted Functional Partners:
MS53_0620
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
   0.972
MS53_0326
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1307.
 
   0.965
plsX
Fatty acid/phospholipid biosynthesis enzyme; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.833
smc
Putative ABC transporter ATP-binding protein P115-like protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
    0.828
rncS
dsRNA-specific ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.825
MS53_0672
Hypothetical protein.
       0.773
MS53_0671
Conserved hypothetical protein; Involved in DNA repair and RecF pathway recombination.
       0.615
frr
Ribosome releasing factor; Identified by sequence similarity; putative; ORF located using Glimmer;GeneMark;Blastx;COG0233.
       0.585
pyrH
Uridylate kinase smbA; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.581
polC
DNA polymerase III alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.440
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.