PAM_243 protein (Onion yellows) - STRING interaction network

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Score

PAM_243

Hypothetical protein; Identified by Glimmer2. (296 aa)

Predicted Functional Partners:

rpmG

0.614

nfnB

0.546

pepP

0.510

topA

0.400

Your Current Organism:

Onion yellows

NCBI taxonomy Id: 262768
Other names: O. yellows phytoplasma OY-M, Onion yellows phytoplasma OY-M

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PAM_243	nfnB	PAM_243	PAM_435	Hypothetical protein; Identified by Glimmer2.	Nitroreductase; Identified by sequence similarity; putative.	0.546
PAM_243	pepP	PAM_243	PAM_245	Hypothetical protein; Identified by Glimmer2.	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	0.510
PAM_243	rpmG	PAM_243	PAM_244	Hypothetical protein; Identified by Glimmer2.	Ribosomal protein L33; Identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family.	0.614
PAM_243	topA	PAM_243	PAM_279	Hypothetical protein; Identified by Glimmer2.	Topoisomerase IA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...]	0.400
nfnB	PAM_243	PAM_435	PAM_243	Nitroreductase; Identified by sequence similarity; putative.	Hypothetical protein; Identified by Glimmer2.	0.546
nfnB	pepP	PAM_435	PAM_245	Nitroreductase; Identified by sequence similarity; putative.	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	0.528
nfnB	topA	PAM_435	PAM_279	Nitroreductase; Identified by sequence similarity; putative.	Topoisomerase IA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...]	0.527
pepP	PAM_243	PAM_245	PAM_243	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	Hypothetical protein; Identified by Glimmer2.	0.510
pepP	nfnB	PAM_245	PAM_435	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	Nitroreductase; Identified by sequence similarity; putative.	0.528
pepP	rpmG	PAM_245	PAM_244	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	Ribosomal protein L33; Identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family.	0.525
pepP	topA	PAM_245	PAM_279	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	Topoisomerase IA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...]	0.804
rpmG	PAM_243	PAM_244	PAM_243	Ribosomal protein L33; Identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family.	Hypothetical protein; Identified by Glimmer2.	0.614
rpmG	pepP	PAM_244	PAM_245	Ribosomal protein L33; Identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL33 family.	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	0.525
topA	PAM_243	PAM_279	PAM_243	Topoisomerase IA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...]	Hypothetical protein; Identified by Glimmer2.	0.400
topA	nfnB	PAM_279	PAM_435	Topoisomerase IA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...]	Nitroreductase; Identified by sequence similarity; putative.	0.527
topA	pepP	PAM_279	PAM_245	Topoisomerase IA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...]	xaa-Pro aminopeptidase; Identified by sequence similarity; putative; Belongs to the peptidase M24B family.	0.804