| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PAM_072 | dut | PAM_072 | PAM_164 | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.948 |
| PAM_072 | tdk | PAM_072 | PAM_104 | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | Thymidine kinase; Identified by sequence similarity; putative. | 0.943 |
| PAM_072 | thyA | PAM_072 | PAM_293 | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.947 |
| PAM_552 | dut | PAM_552 | PAM_164 | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.948 |
| PAM_552 | folA | PAM_552 | PAM_294 | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | Dihydrofolate reductase; Identified by sequence similarity; putative; Belongs to the dihydrofolate reductase family. | 0.402 |
| PAM_552 | tdk | PAM_552 | PAM_104 | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | Thymidine kinase; Identified by sequence similarity; putative. | 0.945 |
| PAM_552 | thyA | PAM_552 | PAM_293 | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.948 |
| dut | PAM_072 | PAM_164 | PAM_072 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | 0.948 |
| dut | PAM_552 | PAM_164 | PAM_552 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | 0.948 |
| dut | folA | PAM_164 | PAM_294 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Dihydrofolate reductase; Identified by sequence similarity; putative; Belongs to the dihydrofolate reductase family. | 0.584 |
| dut | glyA | PAM_164 | PAM_181 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.569 |
| dut | tdk | PAM_164 | PAM_104 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Thymidine kinase; Identified by sequence similarity; putative. | 0.979 |
| dut | thyA | PAM_164 | PAM_293 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.981 |
| dut | tmk | PAM_164 | PAM_230 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.948 |
| dut | tmk-2 | PAM_164 | PAM_344 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.948 |
| dut | tmk-4 | PAM_164 | PAM_521 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.948 |
| dut | tmk-5 | PAM_164 | PAM_688 | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.948 |
| folA | PAM_552 | PAM_294 | PAM_552 | Dihydrofolate reductase; Identified by sequence similarity; putative; Belongs to the dihydrofolate reductase family. | Hypothetical protein; Possible pseudogene of thymidylate kinase; identified by sequence similarity; putative. | 0.402 |
| folA | dut | PAM_294 | PAM_164 | Dihydrofolate reductase; Identified by sequence similarity; putative; Belongs to the dihydrofolate reductase family. | dUTPase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.584 |
| folA | glyA | PAM_294 | PAM_181 | Dihydrofolate reductase; Identified by sequence similarity; putative; Belongs to the dihydrofolate reductase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.966 |