Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAM_296Conserved hypothetical protein; Identified by sequence similarity; putative; predicted redox protein. (142 aa)    
Predicted Functional Partners:
PAM_027
Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum.
  
   
 0.716
PAM_137
Conserved hypothetical protein; Identified by sequence similarity; putative.
  
  
 0.697
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Identified by sequence similarity; putative.
 
   
 0.658
folA
Dihydrofolate reductase; Identified by sequence similarity; putative; Belongs to the dihydrofolate reductase family.
     
 0.624
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
       0.602
norM
Na+-driven multidrug efflux pump; Identified by sequence similarity; putative.
 
     0.533
PAM_632
Conserved hypothetical protein; Identified by sequence similarity; putative; Belongs to the ArsC family.
  
  
 0.530
argE-2
Possible pseudogene of acetylornithine deacetylase; identified by sequence similarity.
       0.501
nadE
NAD synthase; Identified by sequence similarity; putative.
 
   
 0.491
PAM_282
Hypothetical protein; Identified by Glimmer2.
 
     0.486
Your Current Organism:
Onion yellows
NCBI taxonomy Id: 262768
Other names: O. yellows phytoplasma OY-M, Onion yellows phytoplasma OY-M
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.