Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
glnQ-2ABC-type polar amino acid transport system, ATPase component; Identified by sequence similarity; putative. (248 aa)    
Predicted Functional Partners:
artM-5
ABC-type amino acid transport system, permease; Identified by sequence similarity; putative.
 
 0.998
artM-6
ABC-type amino acid transport system, permease; Identified by sequence similarity; putative.
 
 0.997
artM-2
ABC-type amino acid transport system, permease; Identified by sequence similarity; putative.
 
 0.994
artM-8
ABC-type amino acid transport system, permease; Identified by sequence similarity; putative.
 
 0.994
artI-2
ABC-type amino acid transport system, periplasmic component; Identified by sequence similarity; putative.
 
 0.988
artM-3
ABC-type amino acid transport system, permease; Identified by sequence similarity; putative.
 
 
 0.976
artI
ABC-type amino acid transport system, periplasmic component; Identified by sequence similarity; putative.
 
 
 0.976
artM-9
ABC-type amino acid transport system, permease; Identified by sequence similarity; putative.
 
 
 0.955
artM
ABC-type amino acid transport system, permease; Identified by sequence similarity; putative.
 
 
 0.943
mdlB
ABC-type multidrug/protein/lipid transport system, ATPase component; Identified by sequence similarity; putative.
    
0.917
Your Current Organism:
Onion yellows
NCBI taxonomy Id: 262768
Other names: O. yellows phytoplasma OY-M, Onion yellows phytoplasma OY-M
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