Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pssAPhosphatidylserine synthase; Identified by sequence similarity; putative. (244 aa)    
Predicted Functional Partners:
psd
Phosphatidylserine decarboxylase; Identified by sequence similarity; putative; Belongs to the phosphatidylserine decarboxylase family.
 
 
 0.998
cdsA
CDP-diglyceride synthetase; Identified by sequence similarity; putative; Belongs to the CDS family.
    
 0.967
PAM_718
Phosphatidylglycerophosphate synthase; Identified by sequence similarity; putative.
  
 
 0.955
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.936
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
     
 0.882
pgpB
Membrane-associated phospholipid phosphatase; Identified by sequence similarity; putative.
 
   
 0.843
PAM_615
Uncharacterized BCR; Identified by sequence similarity; putative.
  
   0.639
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Identified by sequence similarity; putative.
     
 0.572
PAM_614
Hypothetical protein; Identified by Glimmer2.
       0.563
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.562
Your Current Organism:
Onion yellows
NCBI taxonomy Id: 262768
Other names: O. yellows phytoplasma OY-M, Onion yellows phytoplasma OY-M
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