Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAM_690 | PAM_691 | PAM_690 | PAM_691 | Hypothetical protein; Identified by Glimmer2. | Hypothetical protein; Identified by Glimmer2. | 0.682 |
PAM_690 | PAM_692 | PAM_690 | PAM_692 | Hypothetical protein; Identified by Glimmer2. | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | 0.496 |
PAM_690 | PAM_694 | PAM_690 | PAM_694 | Hypothetical protein; Identified by Glimmer2. | Hypothetical protein; Identified by Glimmer2. | 0.496 |
PAM_690 | hflB-14 | PAM_690 | PAM_695 | Hypothetical protein; Identified by Glimmer2. | ATP-dependent Zn protease; Identified by sequence similarity; putative; FtsH; Belongs to the AAA ATPase family. | 0.464 |
PAM_690 | smc-5 | PAM_690 | PAM_693 | Hypothetical protein; Identified by Glimmer2. | Chromosome segregation ATPase homolog; Identified by sequence similarity; putative. | 0.496 |
PAM_691 | PAM_690 | PAM_691 | PAM_690 | Hypothetical protein; Identified by Glimmer2. | Hypothetical protein; Identified by Glimmer2. | 0.682 |
PAM_691 | PAM_692 | PAM_691 | PAM_692 | Hypothetical protein; Identified by Glimmer2. | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | 0.556 |
PAM_691 | PAM_694 | PAM_691 | PAM_694 | Hypothetical protein; Identified by Glimmer2. | Hypothetical protein; Identified by Glimmer2. | 0.556 |
PAM_691 | hflB-14 | PAM_691 | PAM_695 | Hypothetical protein; Identified by Glimmer2. | ATP-dependent Zn protease; Identified by sequence similarity; putative; FtsH; Belongs to the AAA ATPase family. | 0.520 |
PAM_691 | smc-5 | PAM_691 | PAM_693 | Hypothetical protein; Identified by Glimmer2. | Chromosome segregation ATPase homolog; Identified by sequence similarity; putative. | 0.556 |
PAM_692 | PAM_690 | PAM_692 | PAM_690 | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | Hypothetical protein; Identified by Glimmer2. | 0.496 |
PAM_692 | PAM_691 | PAM_692 | PAM_691 | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | Hypothetical protein; Identified by Glimmer2. | 0.556 |
PAM_692 | PAM_694 | PAM_692 | PAM_694 | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | Hypothetical protein; Identified by Glimmer2. | 0.773 |
PAM_692 | PAM_696 | PAM_692 | PAM_696 | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | Hypothetical protein; Identified by Glimmer2. | 0.460 |
PAM_692 | hflB-14 | PAM_692 | PAM_695 | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | ATP-dependent Zn protease; Identified by sequence similarity; putative; FtsH; Belongs to the AAA ATPase family. | 0.746 |
PAM_692 | smc-5 | PAM_692 | PAM_693 | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | Chromosome segregation ATPase homolog; Identified by sequence similarity; putative. | 0.951 |
PAM_694 | PAM_690 | PAM_694 | PAM_690 | Hypothetical protein; Identified by Glimmer2. | Hypothetical protein; Identified by Glimmer2. | 0.496 |
PAM_694 | PAM_691 | PAM_694 | PAM_691 | Hypothetical protein; Identified by Glimmer2. | Hypothetical protein; Identified by Glimmer2. | 0.556 |
PAM_694 | PAM_692 | PAM_694 | PAM_692 | Hypothetical protein; Identified by Glimmer2. | Conserved hypothetical protein; Identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum. | 0.773 |
PAM_694 | PAM_696 | PAM_694 | PAM_696 | Hypothetical protein; Identified by Glimmer2. | Hypothetical protein; Identified by Glimmer2. | 0.401 |
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