Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAM_757Hypothetical protein; Identified by Glimmer2. (47 aa)    
Predicted Functional Partners:
himA-15
Bacterial nucleoid DNA-binding protein; Identified by sequence similarity; putative; Belongs to the bacterial histone-like protein family.
       0.752
PAM_756
Hypothetical protein; Identified by Glimmer2.
       0.651
ssb-15
Single-stranded DNA-binding protein; Identified by sequence similarity; putative.
       0.583
rpoD-4
DNA-directed RNA polymerase sigma subunit; Identified by sequence similarity; putative; Belongs to the sigma-70 factor family.
       0.583
PAM_755
Hypothetical protein; Identified by Glimmer2.
       0.474
Your Current Organism:
Onion yellows
NCBI taxonomy Id: 262768
Other names: O. yellows phytoplasma OY-M, Onion yellows phytoplasma OY-M
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.