STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE81614.1Protein-S-isoprenylcysteine O-methyltransferase Ste14. (451 aa)    
Predicted Functional Partners:
SCE81633.1
Hypothetical protein.
 
     0.830
SCE81595.1
Hypothetical protein.
       0.823
SCF22790.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.759
SCF39534.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.667
SCE97821.1
Selenium-binding protein 1.
    
  0.653
SCE87641.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.585
SCF36322.1
Thiosulfate sulfurtransferase.
    
  0.585
SCE68961.1
Hypothetical protein.
  
     0.574
SCE83216.1
ABC-2 type transport system permease protein.
  
    0.549
SCF03029.1
Protein of unknown function (DUF4184).
 
     0.543
Your Current Organism:
Micromonospora mirobrigensis
NCBI taxonomy Id: 262898
Other names: DSM 44830, JCM 13240, LMG 22229, LMG:22229, M. mirobrigensis, Micromonospora mirobrigensis Trujillo et al. 2005, Micromonospora sp. WA201, NBRC 101890, strain WA201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.