STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE71404.1Sporulation and spore germination. (605 aa)    
Predicted Functional Partners:
SCE71421.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
     0.940
SCE71437.1
Two-component system, OmpR family, response regulator MtrA.
     
 0.858
SCE71390.1
Predicted amidophosphoribosyltransferases.
       0.829
SCE72462.1
Hypothetical protein.
  
     0.770
SCF09498.1
Hypothetical protein.
  
    0.764
SCE86453.1
Hypothetical protein.
  
     0.761
SCF23729.1
Arylsulfatase A.
  
     0.760
SCF47121.1
Glyoxalase-like domain-containing protein.
  
     0.755
SCE85313.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.752
SCF23482.1
Hypothetical protein.
  
     0.740
Your Current Organism:
Micromonospora mirobrigensis
NCBI taxonomy Id: 262898
Other names: DSM 44830, JCM 13240, LMG 22229, LMG:22229, M. mirobrigensis, Micromonospora mirobrigensis Trujillo et al. 2005, Micromonospora sp. WA201, NBRC 101890, strain WA201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.