STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF11409.1ABC-2 family transporter protein. (270 aa)    
Predicted Functional Partners:
SCF11395.1
ABC-2 type transport system ATP-binding protein.
 
     0.851
SCF35774.1
ABC-2 family transporter protein.
  
  0.645
SCF35980.1
ABC-2 type transport system permease protein.
  
  0.638
SCE69189.1
ABC-2 family transporter protein.
  
 
0.626
SCE67370.1
ABC-2 family transporter protein.
   
  0.581
SCE71879.1
ABC-2 family transporter protein.
   
  0.581
SCE91746.1
ABC-2 type transport system permease protein.
   
  0.581
SCF13867.1
ABC-2 type transport system permease protein.
   
  0.581
SCF13898.1
ABC-2 type transport system permease protein.
   
  0.571
SCF11169.1
Acyltransferase.
  
    0.564
Your Current Organism:
Micromonospora mirobrigensis
NCBI taxonomy Id: 262898
Other names: DSM 44830, JCM 13240, LMG 22229, LMG:22229, M. mirobrigensis, Micromonospora mirobrigensis Trujillo et al. 2005, Micromonospora sp. WA201, NBRC 101890, strain WA201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.