Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCE65357.1 | SCE81328.1 | GA0070564_101140 | GA0070564_1011096 | Hypothetical protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.740 |
SCE65357.1 | SCF16204.1 | GA0070564_101140 | GA0070564_103569 | Hypothetical protein. | Hypothetical protein. | 0.401 |
SCE65357.1 | SCF29973.1 | GA0070564_101140 | GA0070564_105245 | Hypothetical protein. | Lysophospholipase L1. | 0.521 |
SCE71685.1 | SCF04121.1 | GA0070564_101513 | GA0070564_102754 | Papain fold toxin 1, glutamine deamidase. | Cellulose binding domain. | 0.626 |
SCE71685.1 | SCF16204.1 | GA0070564_101513 | GA0070564_103569 | Papain fold toxin 1, glutamine deamidase. | Hypothetical protein. | 0.709 |
SCE71685.1 | SCF29973.1 | GA0070564_101513 | GA0070564_105245 | Papain fold toxin 1, glutamine deamidase. | Lysophospholipase L1. | 0.552 |
SCE71685.1 | SCF33727.1 | GA0070564_101513 | GA0070564_10621 | Papain fold toxin 1, glutamine deamidase. | Peptidase family M23. | 0.461 |
SCE71685.1 | SCF39743.1 | GA0070564_101513 | GA0070564_107253 | Papain fold toxin 1, glutamine deamidase. | Endoglucanase. | 0.626 |
SCE81328.1 | SCE65357.1 | GA0070564_1011096 | GA0070564_101140 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Hypothetical protein. | 0.740 |
SCE81328.1 | SCF16204.1 | GA0070564_1011096 | GA0070564_103569 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Hypothetical protein. | 0.416 |
SCE81328.1 | SCF29973.1 | GA0070564_1011096 | GA0070564_105245 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Lysophospholipase L1. | 0.609 |
SCE81328.1 | SCF33727.1 | GA0070564_1011096 | GA0070564_10621 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Peptidase family M23. | 0.445 |
SCF04121.1 | SCE71685.1 | GA0070564_102754 | GA0070564_101513 | Cellulose binding domain. | Papain fold toxin 1, glutamine deamidase. | 0.626 |
SCF04121.1 | SCF16204.1 | GA0070564_102754 | GA0070564_103569 | Cellulose binding domain. | Hypothetical protein. | 0.626 |
SCF04121.1 | SCF21219.1 | GA0070564_102754 | GA0070564_104155 | Cellulose binding domain. | Pectate lyase superfamily protein. | 0.428 |
SCF04121.1 | SCF29973.1 | GA0070564_102754 | GA0070564_105245 | Cellulose binding domain. | Lysophospholipase L1. | 0.644 |
SCF04121.1 | SCF39743.1 | GA0070564_102754 | GA0070564_107253 | Cellulose binding domain. | Endoglucanase. | 0.589 |
SCF16204.1 | SCE65357.1 | GA0070564_103569 | GA0070564_101140 | Hypothetical protein. | Hypothetical protein. | 0.401 |
SCF16204.1 | SCE71685.1 | GA0070564_103569 | GA0070564_101513 | Hypothetical protein. | Papain fold toxin 1, glutamine deamidase. | 0.709 |
SCF16204.1 | SCE81328.1 | GA0070564_103569 | GA0070564_1011096 | Hypothetical protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.416 |
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