STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF36906.1Two component transcriptional regulator, LuxR family. (221 aa)    
Predicted Functional Partners:
SCF36914.1
Signal transduction histidine kinase.
 
  0.933
SCE83281.1
Signal transduction histidine kinase.
   
 0.878
SCF28396.1
Signal transduction histidine kinase.
 
  0.858
SCF27418.1
Signal transduction histidine kinase.
 
  0.858
SCF47259.1
Signal transduction histidine kinase.
  
  0.858
SCE95236.1
Signal transduction histidine kinase.
  
  0.832
SCE91916.1
Histidine kinase.
  
  0.824
SCF45558.1
Signal transduction histidine kinase.
  
  0.810
SCE65183.1
Signal transduction histidine kinase.
  
  0.808
SCF31179.1
Signal transduction histidine kinase.
  
  0.794
Your Current Organism:
Micromonospora mirobrigensis
NCBI taxonomy Id: 262898
Other names: DSM 44830, JCM 13240, LMG 22229, LMG:22229, M. mirobrigensis, Micromonospora mirobrigensis Trujillo et al. 2005, Micromonospora sp. WA201, NBRC 101890, strain WA201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.