STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB47912.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
AEB42164.1
Hypothetical protein.
  
     0.770
AEB43222.1
Hypothetical protein.
  
     0.760
AEB43046.1
Hypothetical protein.
  
     0.699
AEB44853.1
Aminotransferase; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
     0.690
AEB47871.1
Cdp-alcohol phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.672
AEB45356.1
Hypothetical protein.
  
     0.663
AEB43189.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.658
AEB47646.1
Hypothetical protein.
  
     0.657
AEB47640.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
     0.649
AEB42739.1
Hypothetical protein.
  
     0.626
Your Current Organism:
Verrucosispora maris
NCBI taxonomy Id: 263358
Other names: V. maris AB-18-032, Verrucosispora maris AB-18-032, Verrucosispora maris str. AB-18-032, Verrucosispora maris strain AB-18-032, Verrucosispora sp. AB-18-032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.