STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB43101.1Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain. (774 aa)    
Predicted Functional Partners:
AEB47335.1
Diguanylate cyclase/phosphodiesterase with gaf sensor; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.673
AEB43102.1
TipAS antibiotic-recognition domain-containing protein; COG0789 Predicted transcriptional regulators.
   
   0.662
AEB42772.1
Diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
0.627
AEB43345.1
Diguanylate cyclase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.613
AEB42993.1
Diguanylate cyclase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.595
AEB46501.1
Diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.576
AEB42298.1
ATP-binding region ATPase domain-containing protein; COG2770 FOG: HAMP domain.
  
 
 0.498
AEB45638.1
COG3300 MHYT domain (predicted integral membrane sensor domain).
    
 0.477
AEB47716.1
Diguanylate cyclase with gaf sensor; COG2199 FOG: GGDEF domain.
 
 
0.469
AEB43473.1
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
 
 
 
0.450
Your Current Organism:
Verrucosispora maris
NCBI taxonomy Id: 263358
Other names: V. maris AB-18-032, Verrucosispora maris AB-18-032, Verrucosispora maris str. AB-18-032, Verrucosispora maris strain AB-18-032, Verrucosispora sp. AB-18-032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.