STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB43156.1Two component transcriptional regulator, luxr family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (232 aa)    
Predicted Functional Partners:
AEB43155.1
COG4585 Signal transduction histidine kinase.
 
 
 0.929
AEB44725.1
Two-component system sensor kinase; COG4585 Signal transduction histidine kinase.
 
 0.819
AEB45676.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 
 0.817
AEB45820.1
Histidine kinase, dimerization and phosphoacceptor region; COG4585 Signal transduction histidine kinase.
 
 0.816
AEB42059.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 
 
 0.815
AEB45371.1
COG4585 Signal transduction histidine kinase.
 
 
 0.796
AEB47485.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 
 0.794
AEB44037.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 
 0.790
AEB45104.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 
 
 0.784
AEB45648.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.773
Your Current Organism:
Verrucosispora maris
NCBI taxonomy Id: 263358
Other names: V. maris AB-18-032, Verrucosispora maris AB-18-032, Verrucosispora maris str. AB-18-032, Verrucosispora maris strain AB-18-032, Verrucosispora sp. AB-18-032
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