STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB44486.1Transposase IS116/IS110/IS902 family protein; COG3547 Transposase and inactivated derivatives. (206 aa)    
Predicted Functional Partners:
AEB44487.1
Hypothetical protein; COG3547 Transposase and inactivated derivatives.
       0.671
AEB45356.1
Hypothetical protein.
  
     0.629
AEB44854.1
Hypothetical protein; COG3835 Sugar diacid utilization regulator.
  
     0.592
AEB46710.1
Hypothetical protein.
  
     0.534
AEB42625.1
Hypothetical protein.
  
     0.491
AEB44488.1
Hypothetical protein.
       0.458
AEB45718.1
Hypothetical protein.
  
     0.452
AEB45069.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
   
 0.427
AEB45967.1
Hypothetical protein.
  
     0.422
AEB44485.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.403
Your Current Organism:
Verrucosispora maris
NCBI taxonomy Id: 263358
Other names: V. maris AB-18-032, Verrucosispora maris AB-18-032, Verrucosispora maris str. AB-18-032, Verrucosispora maris strain AB-18-032, Verrucosispora sp. AB-18-032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.