STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB45336.1Bifunctional D-altronate/D-mannonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily. (409 aa)    
Predicted Functional Partners:
AEB45905.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
  
 0.962
AEB45337.1
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
  
 0.961
AEB44999.1
2-deoxy-D-gluconate 3-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
  
  0.922
AEB45991.1
Kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family.
 
  
 0.833
AEB45338.1
2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
   
 0.819
AEB46729.1
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
  0.801
AEB47978.1
6-phosphogluconate dehydrogenase-like protein; COG1023 Predicted 6-phosphogluconate dehydrogenase.
     
  0.800
AEB44129.1
COG0036 Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
AEB46809.1
COG0698 Ribose 5-phosphate isomerase RpiB.
     
  0.800
AEB45335.1
COG3265 Gluconate kinase.
       0.792
Your Current Organism:
Verrucosispora maris
NCBI taxonomy Id: 263358
Other names: V. maris AB-18-032, Verrucosispora maris AB-18-032, Verrucosispora maris str. AB-18-032, Verrucosispora maris strain AB-18-032, Verrucosispora sp. AB-18-032
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