STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB45530.1Arabinose efflux permease family protein; COG0477 Permeases of the major facilitator superfamily. (436 aa)    
Predicted Functional Partners:
AEB45529.1
Thiopurine S-methyltransferase; COG0500 SAM-dependent methyltransferases.
 
     0.808
AEB45528.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.775
AEB45531.1
Carbamoyl-phosphate synthase, large subunit, CarB; COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
       0.773
AEB45532.1
Hypothetical protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
       0.773
AEB45533.1
Thioesterase type II; COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
       0.773
AEB42445.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.732
AEB45536.1
COG0031 Cysteine synthase.
  
  
 0.590
AEB45539.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.568
AEB45538.1
Fumarate lyase; COG0165 Argininosuccinate lyase.
     
 0.567
AEB45534.1
SyrP-like protein.
       0.566
Your Current Organism:
Verrucosispora maris
NCBI taxonomy Id: 263358
Other names: V. maris AB-18-032, Verrucosispora maris AB-18-032, Verrucosispora maris str. AB-18-032, Verrucosispora maris strain AB-18-032, Verrucosispora sp. AB-18-032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.