Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO00285-methylcytosine-specific restriction enzyme B. (523 aa)    
Predicted Functional Partners:
PTO0027
Hypothetical protein.
 
 0.994
PTO0077
Type I restriction-modification system specificity subunit.
  
 
 0.633
mptA
Hypothetical conserved protein DUF198; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
       0.561
PTO0860
Zinc metalloprotease; Similar to TldD/PmbA.
     
  0.510
PTO0251
Putative RNA-binding protein; Contains S1 and KH domains.
       0.455
PTO0078
Type I restriction-modification system methylation subunit.
    
 0.448
PTO0252
Serine/threonine protein kinase.
       0.444
PTO0075
Hypothetical protein.
 
     0.417
PTO0076
Type I restriction-modification system restriction subunit.
     
 0.406
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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