STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0089glycerol-3-P ABC transporter permease protein. (296 aa)    
Predicted Functional Partners:
PTO0088
glycerol-3-P ABC transporter permease protein.
 0.993
PTO0090
glycerol-3-P ABC transporter solute binding protein.
 
 0.974
PTO0087
glycerol-3-P ABC transporter ATP binding protein.
 
  
 0.939
PTO0580
Maltose ABC transporter permease protein.
 0.937
PTO1034
Sugar ABC transporter 1, permease protein.
 
 0.920
PTO1393
Alpha glucoside ABC transporter permease protein.
 0.916
PTO0582
Maltose ABC transporter solute binding protein.
 
 0.783
PTO1390
Alpha glucoside ABC transporter solute binding protein.
 
 0.729
PTO1036
Sugar ABC transporter 1, extracellular binding protein.
  
 0.704
PTO1088
Sugar binding protein.
  
 0.695
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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