Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PTO0090glycerol-3-P ABC transporter solute binding protein. (526 aa)    
Predicted Functional Partners:
PTO0089
glycerol-3-P ABC transporter permease protein.
 
 0.974
PTO0088
glycerol-3-P ABC transporter permease protein.
 
 0.966
PTO0087
glycerol-3-P ABC transporter ATP binding protein.
    
  0.890
PTO0091
Alpha-mannosidase.
 
     0.838
PTO1447
Oligopeptide ABC transporter Opp2, extracellular binding protein.
  
  
  0.831
PTO1494
Sugar ABC transporter fusion protein.
 
 0.825
PTO0096
ABC-type multidrug transport system, permease component.
 
  
  0.814
PTO1034
Sugar ABC transporter 1, permease protein.
 
 0.809
PTO0581
Maltose ABC transporter permease protein.
 
 0.792
PTO1392
Alpha glucoside ABC transporter permease protein.
 
 0.789
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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