STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO0096ABC-type multidrug transport system, permease component. (254 aa)    
Predicted Functional Partners:
PTO0095
ABC-type multidrug transport system, ATPase component.
 
  
 0.953
PTO1096
Daunorubicin resistance ATP-binding protein DrrA.
 
  
 0.866
PTO1097
Daunorubicin resistance ATP-binding protein DrrB.
  
  
  0.797
PTO0729
Daunorubicin resistance ATP-binding protein DrrA.
 
  
 0.746
PTO0094
Hypothetical membrane spanning protein.
       0.732
PTO1499
Multi drug ABC transporter ATP binding protein.
 
  
 0.535
PTO0093
Phosphate transporter.
       0.516
PTO0097
Hypothetical membrane spanning protein.
       0.486
PTO0201
ABC transporter ATP-binding protein.
 
  
 0.482
PTO0087
glycerol-3-P ABC transporter ATP binding protein.
    
  0.480
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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