Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTO0100Transporter. (409 aa)    
Predicted Functional Partners:
PTO0797
Sugar transporter.
  
     0.595
PTO0766
Amino acid permease.
  
   0.576
PTO0101
Hypothetical protein.
       0.556
PTO0459
Hypothetical sugar transporter.
  
     0.540
PTO1169
Transporter.
  
     0.525
PTO0610
Transporter.
  
     0.521
PTO0946
Amino acid transporter.
  
   0.514
PTO0974
Transporter.
 
     0.501
PTO1267
Transporter.
  
     0.498
PTO0775
Sugar transporter.
  
     0.497
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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