STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiDCobalamin biosynthetic protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (341 aa)    
Predicted Functional Partners:
PTO1434
Decarboxylating precorrin-6Y C5,15-methyltransferase.
  
 0.999
PTO0109
Cobalamin biosynthesis protein CbiG.
 
 
 0.997
PTO0111
precorrin-8X methylmutase.
  
 0.993
PTO0112
precorrin-6X reductase.
  
 
 0.990
PTO0039
precorrin-6X reductase.
  
 
 0.957
PTO1320
iron(III) dicitrate tABC ransporter, ATP-binding protein.
    
 0.908
PTO0041
Precorrin-2 C20-methyltransferase.
  
  
 
0.903
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
  
 0.893
PTO1432
Precorrin-4 C11-methyltransferase.
 
  
 0.795
PTO0993
precorrin-3B C17-methyltransferase.
 
  
 0.793
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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