STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
menCO-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (363 aa)    
Predicted Functional Partners:
PTO0575
Carboxypeptidase G2 precursor.
   
 0.822
PTO1022
medium-chain-fatty-acid--CoA ligase.
 
 
  0.801
PTO0563
Hypothetical protein.
    
  0.791
PTO1520
Chorismate synthase.
     0.763
PTO0136
Prenyltransferase.
     
 0.707
PTO1448
Oligopeptide ABC transporter Opp2, permease protein.
 
    0.597
PTO0117
Hypothetical membrane spanning protein.
       0.554
PTO0115
Transcriptional regulator.
     
 0.514
PTO0216
Dipeptide ABC transporter Dpp1, permease protein.
 
    0.514
PTO1237
6-phosphofructokinase.
    
 0.448
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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